Structure of PDB 5g4a Chain A Binding Site BS01

Receptor Information

>5g4a Chain A (length=261) Species: 28901 (Salmonella enterica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TLSIPPSIQCQTEAACRLITRVTGDTLRAIHLYGSAVAGGLKPNSDIDLL
VTICQPLTEAQRATLMQELLALSSPPGASAEKRALEVTVVLYSQLVPWCF
PPSREMQFGEWLREDICQGIYEPAQQDWDMVLLITQILETSIPLKGERAE
RLFTPAPAAQLLKALRYPLDLWQSTADVQGDEYHIVLTLARIWYTLSTGR
FTSKDAAADWLLPQLPEDYAATLRAAQREYLGLEQQDWHILLPAVVRFVD
FAKAHIPTQFT

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

5g4a Chain A Residue 3263 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5g4a Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica.
Resolution	1.9 Å
Binding residue (original residue number in PDB)	D47 D49
Binding residue (residue number reindexed from 1)	D46 D48
Annotation score	1

Enzymatic activity

Enzyme Commision number

2.7.7.47: streptomycin 3''-adenylyltransferase.

Gene Ontology

	Molecular Function
GO:0005524	ATP binding
GO:0009012	aminoglycoside 3''-adenylyltransferase activity
GO:0016779	nucleotidyltransferase activity
GO:0046872	metal ion binding
GO:0070566	adenylyltransferase activity

	Biological Process
GO:0046677	response to antibiotic

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:5g4a, PDBe:5g4a, PDBj:5g4a
PDBsum	5g4a
PubMed	29871922
UniProt	Q8ZPX9\|S3AD_SALTY Aminoglycoside (3'') (9) adenylyltransferase (Gene Name=aadA)

[Back to BioLiP]