Structure of PDB 5fox Chain A Binding Site BS01
Receptor Information
>5fox Chain A (length=222) Species:
2261
(Pyrococcus furiosus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQL
PPEEGGLNGSVMWIDTENTFRPERIREIAQNRGLDPDEVLKHIAYARAFN
SNHQMLLVQQAEDMIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAER
QQKLAKHLADLHRLANLYDIAVFVTNQVLAHSATLRVYLRKGKGGKRIAR
LIDAPLPEGEAVFSITEKGIED
Ligand information
>5fox Chain C (length=4) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
FHAA
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5fox
Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
Resolution
1.3 Å
Binding residue
(original residue number in PDB)
M169 F177 L197 I200 A201 Y202 A203 L214 A218
Binding residue
(residue number reindexed from 1)
M62 F70 L90 I93 A94 Y95 A96 L107 A111
Enzymatic activity
Enzyme Commision number
3.6.4.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003684
damaged DNA binding
GO:0005524
ATP binding
GO:0008094
ATP-dependent activity, acting on DNA
GO:0016887
ATP hydrolysis activity
GO:0140664
ATP-dependent DNA damage sensor activity
Biological Process
GO:0006259
DNA metabolic process
GO:0006281
DNA repair
GO:0006310
DNA recombination
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5fox
,
PDBe:5fox
,
PDBj:5fox
PDBsum
5fox
PubMed
26992456
UniProt
O74036
|RADA_PYRFU DNA repair and recombination protein RadA (Gene Name=radA)
[
Back to BioLiP
]