Structure of PDB 5f56 Chain A Binding Site BS01

Receptor Information
>5f56 Chain A (length=703) Species: 1299 (Deinococcus radiodurans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SRPAHWLLAPPASRDALLATMREWQVSPPVAQVLCGRDLRTELLALPLEL
TPNPALREAARHIVAAVREGKRIRIHGDYDADGVSATATLVLGLRAIGAN
VHGFIPHRLNEGYGIHPDRVPEHAAAADLVVTVDCGVSNLDEVKSLLATG
TEVVVTDHHAPGENFPECLVVHPHLTPDYDPDRHNLTGAGVAYHLLWAVY
EELGRPEPRALLPLATLGTVADVAPLLGENRALVRAGLAEMARTELPGLR
ALMNEKRVRQPTARDVAFILAPRINAAGRMGEADRALELLTTPSDHEAKS
LAAYLEIRNQERRKIQDDMFAQALQLADPNDPALVLTHDDWHAGVMGIVA
SKLVETFNRPVYIVAQGKGSVRSTPGISAVQGLRESRDLLGRFGGHPGAA
GFSLDPQNFGALRERIHGYVRQFPTPVPAVRLDAPLPVAALTPELLSELS
ILEPFGEGNPRPLWHLRGPLTDTRLVGKQGDVLQFRFGGVKGMKYSERDD
AAGERDVAAELALNEWKGRTSLELHAAALRPLAPLALAGTEEGLPTLPRL
NPREAMTFLKTGAAAYAEQGVATYLRDNVPGLTLLDTNAPHPGGDLILYG
LPPESALRRWLHEAQEQGGRVAFALGPKTLAELDAALTLAKLLPDSHTEA
AQEAAADAYRSWQWAHHYRVLNDAGWSASVYAMLGLPVPAALPKAAEALA
LAA
Ligand information
Receptor-Ligand Complex Structure
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PDB5f56 Structural basis for DNA 5 -end resection by RecJ
Resolution2.3 Å
Binding residue
(original residue number in PDB)
Y114 R265 F269 P273 N276 R280 R313 R314 E356 R373 G395 H397 G402 V477 G478 V483 Q485 K492 M494 Y496 N515 W517
Binding residue
(residue number reindexed from 1)
Y113 R264 F268 P272 N275 R279 R312 R313 E355 R372 G394 H396 G401 V476 G477 V482 Q484 K491 M493 Y495 N514 W516
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004527 exonuclease activity
GO:0008409 5'-3' exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination

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Molecular Function

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Biological Process
External links
PDB RCSB:5f56, PDBe:5f56, PDBj:5f56
PDBsum5f56
PubMed27058167
UniProtD0EM60

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