Structure of PDB 5emi Chain A Binding Site BS01

Receptor Information
>5emi Chain A (length=180) Species: 63737 (Nostoc punctiforme PCC 73102) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSGKLLVVIDPGHGGKDSGAPGLGGLLEKDVILPIGKRVAAILEQHGVQA
VLTRDADFFVELQGRVEIAERVNATAFVSIHANSVDNRPDVNGLEVYYYD
SGYALAEVVRNTILQNIDTIKNRGTRKARFYVLRKSSMPSILVETGYMTG
REDNPRLASREYQNQMAEAIARGILKYLQR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5emi Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5emi Enabling cell-cell communication via nanopore formation: structure, function and localization of the unique cell wall amidase AmiC2 of Nostoc punctiforme.
Resolution1.12 Å
Binding residue
(original residue number in PDB)		H447 E462 H515
Binding residue
(residue number reindexed from 1)		H13 E28 H81
Annotation score4
Enzymatic activity
Enzyme Commision number 3.5.1.28: N-acetylmuramoyl-L-alanine amidase.
Gene Ontology
Molecular Function
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
Biological Process
GO:0009253 peptidoglycan catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5emi, PDBe:5emi, PDBj:5emi
PDBsum5emi
PubMed26833702
UniProtB2J2S4

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