Structure of PDB 5dtf Chain A Binding Site BS01

Receptor Information
>5dtf Chain A (length=207) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EESGGRLVTPGTPLTLTCTVSACSLYHCTMNWVRQAPGKGLEWIGDIYTD
GNTYYANWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARDSWDASSYY
GLDLWGQGTLVTVSSGQPKGPSVFPLAPCSSTVTLGCLVKGYLPEPVTVT
WNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSSQPVTCNVAHPATNTK
VDKTVAP
Ligand information
Ligand ID5CT
InChIInChI=1S/C10H23N3O3/c11-5-4-8(14)7-13-6-2-1-3-9(12)10(15)16/h8-9,13-14H,1-7,11-12H2,(H,15,16)/t8-,9-/m0/s1
InChIKeyBZUIJMCJNWUGKQ-IUCAKERBSA-N
SMILES
SoftwareSMILES
CACTVS 3.385NCC[C@H](O)CNCCCC[C@H](N)C(O)=O
OpenEye OEToolkits 2.0.4C(CCNCC(CCN)O)CC(C(=O)O)N
OpenEye OEToolkits 2.0.4C(CCNC[C@H](CCN)O)C[C@@H](C(=O)O)N
CACTVS 3.385NCC[CH](O)CNCCCC[CH](N)C(O)=O
ACDLabs 12.01C(CCNCC(O)CCN)CC(C(=O)O)N
FormulaC10 H23 N3 O3
NameHypusine;
N~6~-[(2S)-4-amino-2-hydroxybutyl]-L-lysine
ChEMBL
DrugBank
ZINCZINC000002020107
PDB chain5dtf Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5dtf Structural Analysis and Optimization of Context-Independent Anti-Hypusine Antibodies.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		N35 D50 D95 W97
Binding residue
(residue number reindexed from 1)		N31 D46 D92 W94
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5dtf, PDBe:5dtf, PDBj:5dtf
PDBsum5dtf
PubMed26778617
UniProtP01870|IGHG_RABIT Ig gamma chain C region

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