Structure of PDB 5ddh Chain A Binding Site BS01
Receptor Information
>5ddh Chain A (length=274) Species:
9606
(Homo sapiens) [
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GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRW
Ligand information
>5ddh Chain C (length=12) Species:
5811
(Toxoplasma gondii) [
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FVLELEPEWTVK
Receptor-Ligand Complex Structure
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PDB
5ddh
Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
Y7 E63 R65 K66 H70 T73 D77 T80 Y99 Y116 T143 K146 W147 V152 Q155 L156 Y159 T163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 R65 K66 H70 T73 D77 T80 Y99 Y116 T143 K146 W147 V152 Q155 L156 Y159 T163 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5ddh
,
PDBe:5ddh
,
PDBj:5ddh
PDBsum
5ddh
PubMed
26824387
UniProt
P04439
|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)
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