Structure of PDB 5daw Chain A Binding Site BS01
Receptor Information
>5daw Chain A (length=288) Species:
227321
(Aspergillus nidulans FGSC A4) [
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KSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKI
EPIPAAKTKDHPNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDA
FHVYGDYWVLMGAVMELAPSNPAQPLHRDMRFSHPIVEYLKPDAPATSIN
FLVALSPFTAENGATHVILGSHKWQNLSNVSMDATVRALMNPGDALLITD
STIHCGGAETTGTETRRLLTITMGISQLTPLESNLAVPRPVIESLTPLAQ
RLLGWASQRSAAPRDIGLLTIRGNSIEKTMNLKAEQPL
Ligand information
Ligand ID
AKG
InChI
InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKey
KPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6
C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385
OC(=O)CCC(=O)C(O)=O
Formula
C5 H6 O5
Name
2-OXOGLUTARIC ACID
ChEMBL
CHEMBL1686
DrugBank
DB08845
ZINC
ZINC000001532519
PDB chain
5daw Chain A Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
5daw
Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
Q131 H134 T172 H211 G213 R223
Binding residue
(residue number reindexed from 1)
Q124 H127 T165 H204 G206 R216
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.14.11.81
: (-)-cyclopenine synthase.
External links
PDB
RCSB:5daw
,
PDBe:5daw
,
PDBj:5daw
PDBsum
5daw
PubMed
26553478
UniProt
Q5AR53
|ASQJ_EMENI Iron/alpha-ketoglutarate-dependent dioxygenase asqJ (Gene Name=asqJ)
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