Structure of PDB 5d8c Chain A Binding Site BS01

Receptor Information
>5d8c Chain A (length=126) Species: 71421 (Haemophilus influenzae Rd KW20) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLS
LLQCLKNTGMSLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAEL
KRYLDLLEYKLAFYQKAKALGSVKAV
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5d8c Structural basis of thiol-based regulation of formaldehyde detoxification in H. influenzae by a MerR regulator with no sensor region.
Resolution2.25 Å
Binding residue
(original residue number in PDB)
Y17 T18 F21 Y22 L62
Binding residue
(residue number reindexed from 1)
Y17 T18 F21 Y22 L62
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5d8c, PDBe:5d8c, PDBj:5d8c
PDBsum5d8c
PubMed27307602
UniProtP44558|Y186_HAEIN Uncharacterized HTH-type transcriptional regulator HI_0186 (Gene Name=HI_0186)

[Back to BioLiP]