Structure of PDB 5crm Chain A Binding Site BS01
Receptor Information
>5crm Chain A (length=133) Species:
9606
(Homo sapiens) [
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HHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWP
FQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTM
FTNCYIYNKPGDDIVLMAEALEKLFLQKINELP
Ligand information
Ligand ID
EB5
InChI
InChI=1S/C15H16N2O3S/c1-3-16-21(19,20)13-9-8-12-14-10(13)6-5-7-11(14)15(18)17(12)4-2/h5-9,16H,3-4H2,1-2H3
InChIKey
AQNBGQLJCYVCBR-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
CCNS(=O)(c2ccc1N(C(c3c1c2ccc3)=O)CC)=O
CACTVS 3.385
CCN[S](=O)(=O)c1ccc2N(CC)C(=O)c3cccc1c23
OpenEye OEToolkits 1.9.2
CCNS(=O)(=O)c1ccc2c3c1cccc3C(=O)N2CC
Formula
C15 H16 N2 O3 S
Name
N,1-diethyl-2-oxo-1,2-dihydrobenzo[cd]indole-6-sulfonamide
ChEMBL
CHEMBL3780093
DrugBank
ZINC
ZINC000005598026
PDB chain
5crm Chain A Residue 203 [
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Receptor-Ligand Complex Structure
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PDB
5crm
Discovery of Benzo[cd]indol-2(1H)-ones as Potent and Specific BET Bromodomain Inhibitors: Structure-Based Virtual Screening, Optimization, and Biological Evaluation
Resolution
1.99 Å
Binding residue
(original residue number in PDB)
W81 P82 F83 L92 L94 N140 I146
Binding residue
(residue number reindexed from 1)
W49 P50 F51 L60 L62 N108 I114
Annotation score
1
Binding affinity
MOAD
: ic50=1.09uM
BindingDB: IC50=1090nM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5crm
,
PDBe:5crm
,
PDBj:5crm
PDBsum
5crm
PubMed
26731490
UniProt
O60885
|BRD4_HUMAN Bromodomain-containing protein 4 (Gene Name=BRD4)
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