Structure of PDB 5bpd Chain A Binding Site BS01

Receptor Information
>5bpd Chain A (length=263) Species: 2261 (Pyrococcus furiosus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYD
VLRSLEKKGFAMTQPGKTNKYRPVHPANVLEKFIQDWQERVKEELEAKKK
AKEELLELMAPLIETEVPKYGVERVWVVRGIKNSTLKTKEMLEEAQNEIL
LADDGFIAVNLEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGK
LELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVWIKDHRVVALFK
EKFNEYWEKAEKV
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5bpd Structural Insights into Nonspecific Binding of DNA by TrmBL2, an Archaeal Chromatin Protein.
Resolution2.4 Å
Binding residue
(original residue number in PDB)
L18 Y19 P47 R48
Binding residue
(residue number reindexed from 1)
L17 Y18 P46 R47
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:5bpd, PDBe:5bpd, PDBj:5bpd
PDBsum5bpd
PubMed26299937
UniProtQ8U3H1|TMBL2_PYRFU Putative HTH-type transcriptional regulator TrmBL2 (Gene Name=trmBL2)

[Back to BioLiP]