Structure of PDB 5axm Chain A Binding Site BS01

Receptor Information
>5axm Chain A (length=213) Species: 2214 (Methanosarcina acetivorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDKTFARAMADTAEL
FIKKSGLSPLFAYTFSDEISFLFTDLPFDGRVEKIDSVVASFLGSALTIK
LRLEEPIAFDSRLVALQKEEIPEYFHRRQLEAWRNFVASWGYYALRNMGR
NEAAKYLKRKKESEIHEMLFERGINLATLPSWQRRGVIISKRKITQNWEI
PKFKSPFLEKLIN
Ligand information
>5axm Chain P (length=73) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gggauuuagcucaguugggagagcgccagacugaagaucuggagguccug
uguucgauccacagaauccccac
<<<<<<..<<<<........>>>>.<<<<<.......>>>>>.....<<<
<<.......>>>>>>>>>>>...
Receptor-Ligand Complex Structure
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PDB5axm Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Resolution2.21 Å
Binding residue
(original residue number in PDB)		D21 R23 N24 F25 K26 D69 R136 N137 S141 Y144 R154 N155 A158 K162 R163 K165 E166
Binding residue
(residue number reindexed from 1)		D19 R21 N22 F23 K24 D67 R134 N135 S139 Y142 R150 N151 A154 K158 R159 K161 E162
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005525 GTP binding
GO:0008193 tRNA guanylyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
GO:0099116 tRNA 5'-end processing

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Molecular Function
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Biological Process
External links
PDB RCSB:5axm, PDBe:5axm, PDBj:5axm
PDBsum5axm
PubMed27051866
UniProtA0A1C7D1G9

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