Structure of PDB 5aqe Chain A Binding Site BS01
Receptor Information
>5aqe Chain A (length=269) Species:
1467
(Lederbergia lenta) [
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AQSVPWGISRVQAPAAHNRGLTGSGVKVAVLDTGISTHPDLNIRGGASFV
PGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSG
SVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAA
SGNSGAGSISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQ
STYPGSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATS
LGSTNLYGSGLVNAEAATR
Ligand information
Ligand ID
VOD
InChI
InChI=1S/C9H10O3S/c1-2-8-3-5-9(6-4-8)7-13(10,11)12/h2-6H,1,7H2,(H,10,11,12)
InChIKey
SDXKWPVFZWZYNK-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
O=S(=O)(O)Cc1ccc(cc1)\C=C
OpenEye OEToolkits 1.7.6
C=Cc1ccc(cc1)CS(=O)(=O)O
CACTVS 3.385
O[S](=O)(=O)Cc1ccc(C=C)cc1
Formula
C9 H10 O3 S
Name
(4-VINYLPHENYL)METHANESULFONIC ACID
ChEMBL
DrugBank
ZINC
PDB chain
5aqe Chain A Residue 1276 [
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Receptor-Ligand Complex Structure
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PDB
5aqe
Bisubstrate Localisation by a Tailored Serine Protease Allows Creation of a Heck-Ase
Resolution
1.1 Å
Binding residue
(original residue number in PDB)
H64 L126 G127 A152 G154 N155 G219 S221
Binding residue
(residue number reindexed from 1)
H62 L124 G125 A150 G152 N153 G213 S215
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
D32 H64 N155 S221
Catalytic site (residue number reindexed from 1)
D32 H62 N153 S215
Enzyme Commision number
3.4.21.62
: subtilisin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0008236
serine-type peptidase activity
GO:0046872
metal ion binding
Biological Process
GO:0006508
proteolysis
GO:0030435
sporulation resulting in formation of a cellular spore
Cellular Component
GO:0005576
extracellular region
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5aqe
,
PDBe:5aqe
,
PDBj:5aqe
PDBsum
5aqe
PubMed
UniProt
P29600
|SUBS_LEDLE Subtilisin Savinase
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