Structure of PDB 4zbz Chain A Binding Site BS01
Receptor Information
>4zbz Chain A (length=192) Species:
273063
(Sulfurisphaera tokodaii str. 7) [
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MDSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDK
EGRPFVGAAGKLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEIT
ACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGKSYVW
KYKEKEIIVFPTYHPAAALYNPNLRKILEEDFKKIRELAITP
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
4zbz Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
4zbz
Crystal structure of family 4 uracil-DNA glycosylase from Sulfolobus tokodaii and a function of tyrosine 170 in DNA binding
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
C14 C17 W20 R23 C86 C102 Y105
Binding residue
(residue number reindexed from 1)
C14 C17 W20 R23 C86 C102 Y105
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.2.2.27
: uracil-DNA glycosylase.
External links
PDB
RCSB:4zbz
,
PDBe:4zbz
,
PDBj:4zbz
PDBsum
4zbz
PubMed
26318717
UniProt
Q96YD0
|UDGA_SULTO Type-4 uracil-DNA glycosylase (Gene Name=STK_22380)
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