Structure of PDB 4xu6 Chain A Binding Site BS01
Receptor Information
>4xu6 Chain A (length=189) Species:
350058
(Mycolicibacterium vanbaalenii PYR-1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MRLRISEAVVLFLLGAVAALIGDHSHVVTGTTVYHTDAVPFVWSSPFWFP
ILVGAATASLAELRLHLPAPRDGVTACQALGGVAAVVGTYVTTALVHAFP
VVPVTALVAAAAAITWCVLGDGPGAAAGVVIAVIGPAVEIALVQLGVFAY
HPDSDGLFGVAPFLAPLYFAFGVVAALLGELAVARRPQL
Ligand information
Ligand ID
TDA
InChI
InChI=1S/C13H26O2/c1-2-3-4-5-6-7-8-9-10-11-12-13(14)15/h2-12H2,1H3,(H,14,15)
InChIKey
SZHOJFHSIKHZHA-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CCCCCCCCCCCCC(=O)O
CACTVS 3.341
CCCCCCCCCCCCC(O)=O
ACDLabs 10.04
O=C(O)CCCCCCCCCCCC
Formula
C13 H26 O2
Name
N-TRIDECANOIC ACID
ChEMBL
CHEMBL107874
DrugBank
DB02448
ZINC
ZINC000001628119
PDB chain
4xu6 Chain A Residue 304 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4xu6
PROTEIN STRUCTURE. Crystal structure of a mycobacterial Insig homolog provides insight into how these sensors monitor sterol levels
Resolution
1.898 Å
Binding residue
(original residue number in PDB)
H26 F49 V53 Y90 E139 Y150 Y168 F171
Binding residue
(residue number reindexed from 1)
H26 F49 V53 Y90 E139 Y150 Y168 F171
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0008289
lipid binding
GO:0042802
identical protein binding
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:4xu6
,
PDBe:4xu6
,
PDBj:4xu6
PDBsum
4xu6
PubMed
26160948
UniProt
A1T557
|INSIG_MYCVP INSIG protein homolog (Gene Name=Mvan_1475)
[
Back to BioLiP
]