Structure of PDB 4xtm Chain A Binding Site BS01

Receptor Information
>4xtm Chain A (length=233) Species: 77050 (Vatairea macrocarpa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SEVVSFSFTKFNPNPKDIILQGDALVTSKGKLQLTKVKDGKPVDHSLGRA
LYAAPIHIWDDSTDRVASFATSFSFVVEAPDESKTADGIAFFLAPPDTQP
QKDGGFLGLFNDSNKSIQTVAVEFDTFSNTWDPSARHIGINVNSIESMKY
VKWGWENGKVANVYISYEASTKTLTASLTYPSNATSYIVSANVDLKSALP
EWVRVGFSATSGLSRDHVETHDVLDWSFTSTLQ
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain4xtm Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4xtm Crystal structure of a recombinant Vatairea macrocarpa seed lectin
Resolution2.7 Å
Binding residue
(original residue number in PDB)
D125 F127 N129 D132
Binding residue
(residue number reindexed from 1)
D125 F127 N129 D132
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4xtm, PDBe:4xtm, PDBj:4xtm
PDBsum4xtm
PubMed
UniProtP81371|LECS_VATMA Seed lectin

[Back to BioLiP]