Structure of PDB 4xje Chain A Binding Site BS01
Receptor Information
>4xje Chain A (length=175) Species:
287
(Pseudomonas aeruginosa) [
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DTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDDIDLTFPG
ERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAE
APQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIES
YRLACTSLGAEKVEVLRAAFRSRYA
Ligand information
Ligand ID
AMP
InChI
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
UDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
Software
SMILES
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
Formula
C10 H14 N5 O7 P
Name
ADENOSINE MONOPHOSPHATE
ChEMBL
CHEMBL752
DrugBank
DB00131
ZINC
ZINC000003860156
PDB chain
4xje Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
4xje
Revisiting the Catalytic Cycle and Kinetic Mechanism of AminoglycosideO-Nucleotidyltransferase(2′′): A Structural and Kinetic Study.
Resolution
1.88 Å
Binding residue
(original residue number in PDB)
G28 D44 D46 D131 Y132 Y135 E138 H148
Binding residue
(residue number reindexed from 1)
G27 D43 D45 D130 Y131 Y134 E137 H147
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4xje
,
PDBe:4xje
,
PDBj:4xje
PDBsum
4xje
PubMed
32100995
UniProt
Q6X3H6
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