Structure of PDB 4wpd Chain A Binding Site BS01
Receptor Information
>4wpd Chain A (length=367) Species:
330779
(Sulfolobus acidocaldarius DSM 639) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERL
EDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADIFSPQKLQTLETFIR
ETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDL
VAFRLGKPGEIFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKL
GYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLYLKAIEEALRY
SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIP
DRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVP
NEVLNGYKRLVVRLKSN
Ligand information
Ligand ID
3SQ
InChI
InChI=1S/C9H7FN2/c10-8-3-1-7(2-4-8)9-5-11-6-12-9/h1-6H,(H,11,12)
InChIKey
QYDAFWKRBZYBOB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
Fc2ccc(c1ncnc1)cc2
OpenEye OEToolkits 1.9.2
c1cc(ccc1c2c[nH]cn2)F
CACTVS 3.385
Fc1ccc(cc1)c2c[nH]cn2
Formula
C9 H7 F N2
Name
4-(4-fluorophenyl)-1H-imidazole
ChEMBL
CHEMBL457835
DrugBank
ZINC
ZINC000005075283
PDB chain
4wpd Chain A Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4wpd
TWO DIMENTIONAL NMR AND X-RAY ANALYSIS OF CYP119 LIGAND DEPENDENT CONFORMATIONAL DYNAMICS
Resolution
2.001 Å
Binding residue
(original residue number in PDB)
L155 G156 A209
Binding residue
(residue number reindexed from 1)
L155 G156 A209
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
F153 A209 E212 T213 T214 C317 L318 G319 E326 L354
Catalytic site (residue number reindexed from 1)
F153 A209 E212 T213 T214 C317 L318 G319 E326 L354
Enzyme Commision number
1.11.1.7
: peroxidase.
1.14.-.-
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0004601
peroxidase activity
GO:0005506
iron ion binding
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0140825
lactoperoxidase activity
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4wpd
,
PDBe:4wpd
,
PDBj:4wpd
PDBsum
4wpd
PubMed
UniProt
Q55080
|CP119_SULAC Cytochrome P450 119 (Gene Name=cyp119)
[
Back to BioLiP
]