Structure of PDB 4v4u Chain A Binding Site BS01
Receptor Information
>4v4u Chain A (length=440) Species:
10515
(Human adenovirus 2) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RNSIRYSELAPLFDTTRVYLVDNKSTDVASLNYQNDHSNFLTTVIQNNDY
SPGEASTQTINLDDRSHWGGDLKTILHTNMPNVNEFMFTNKFKARVMVSR
SLTKDKQVELKYEWVEFTLPEGNYSETMTIDLMNNAIVEHYLKVGRQNGV
LESDIGVKFDTRNFRLGFDPVTGLVMPGVYTNEAFHPDIILLPGCGVDFT
HSRLSNLLGIRKRQPFQEGFRITYDDLEGGNIPALLDVDAYQASLKKPVI
KPLTEDSKKRSYNLISNDSTFTQYRSWYLAYNYGDPQTGIRSWTLLCTPD
VTCGSEQVYWSLPDMMQDPVTFRSTSQISNFPVVGAELLPVHSKSFYNDQ
AVYSQLIRQFTSLTHVFNRFPENQILARPPAPTITTVSENVPALTDHGTL
PLRNSIGGVQRVTITDARRRTCPYVYKALGIVSPRVLSSR
Ligand information
>4v4u Chain S (length=10) Species:
10515
(Human adenovirus 2) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
TFNPVYPYDT
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4v4u
A Quasi-Atomic Model of Human Adenovirus Type 5 Capsid.
Resolution
10.0 Å
Binding residue
(original residue number in PDB)
R197 E203 K387 T493 H494 R498 F499 P500
Binding residue
(residue number reindexed from 1)
R146 E152 K258 T364 H365 R369 F370 P371
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005198
structural molecule activity
Biological Process
GO:0019062
virion attachment to host cell
GO:0046718
symbiont entry into host cell
GO:0075509
endocytosis involved in viral entry into host cell
GO:0075512
clathrin-dependent endocytosis of virus by host cell
Cellular Component
GO:0039623
T=25 icosahedral viral capsid
GO:0042025
host cell nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4v4u
,
PDBe:4v4u
,
PDBj:4v4u
PDBsum
4v4u
PubMed
15861131
UniProt
P03276
|CAPSP_ADE02 Penton protein (Gene Name=L2)
[
Back to BioLiP
]