Structure of PDB 4txn Chain A Binding Site BS01
Receptor Information
>4txn Chain A (length=287) Species:
6183
(Schistosoma mansoni) [
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VNSHLSELDEDVFHHFGFTTKSFDFKEKFGDVKFVCVCGSSGRIHNFAIS
MAKLAGLPVENIAGSHARFVLYKVDHILFADHGMGIPSALIMLHEVTKLL
HYAGCKDVLFIRLGTSGGLGVKPGTIVLSDRCVNTKLEPYNELCILGKPV
RRQTIVDLNTVNELKKLSENLSLECSVVVGGTIAANDFYEEQGRLDGSIC
TFSKEEKLAFLQSAYEHGIRNMEMEGTAITSHCYLTGHRAILVCVTAVNR
LEGDQITISTDEFTLFAQRPGQLVGEYLKRNNGIIVR
Ligand information
Ligand ID
URF
InChI
InChI=1S/C4H3FN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)
InChIKey
GHASVSINZRGABV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1=C(C(=O)NC(=O)N1)F
ACDLabs 10.04
CACTVS 3.341
FC1=CNC(=O)NC1=O
Formula
C4 H3 F N2 O2
Name
5-FLUOROURACIL
ChEMBL
CHEMBL185
DrugBank
DB00544
ZINC
ZINC000038212689
PDB chain
4txn Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
4txn
Analysis of two Schistosoma mansoni uridine phosphorylases isoforms suggests the emergence of a protein with a non-canonical function.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
T124 S125 G126 F197 Q201 R203 M231 E232
Binding residue
(residue number reindexed from 1)
T115 S116 G117 F188 Q192 R194 M222 E223
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.2.3
: uridine phosphorylase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0004850
uridine phosphorylase activity
GO:0016757
glycosyltransferase activity
GO:0042802
identical protein binding
GO:0047847
deoxyuridine phosphorylase activity
Biological Process
GO:0006218
uridine catabolic process
GO:0009116
nucleoside metabolic process
GO:0009166
nucleotide catabolic process
GO:0044206
UMP salvage
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4txn
,
PDBe:4txn
,
PDBj:4txn
PDBsum
4txn
PubMed
26898674
UniProt
G4VGI0
|UPPA_SCHMA Uridine phosphorylase A (Gene Name=UPPA)
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