Structure of PDB 4tqg Chain A Binding Site BS01
Receptor Information
>4tqg Chain A (length=297) Species:
1094892
(Megavirus chiliensis) [
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SQINDKTIMIFGGSGSLGNRLIETYINNNIIVNYSRDESKHWSMELKYKS
DKLKNIIGDIRDFEKVQQSIMRINPDIIIIAAALKHIDRCEYEINECLDT
NIKGLQNVLKVTEINRSNLSNLKAVCFVSTDKACSPVNSYGMSKAICETL
VVEKSKYIKDIKYVCVRYGNVLNFTLTHTSMTRFIMTLDDSVKLIEYAII
NGNSGEIVIPKLNSMYIKDMIELFADKYPIVITGLRSGERMYESLINDTQ
SMKTVPKGDYYHILPTYDPTIVTEEFYEYSSKQNILSKQELENYLNQ
Ligand information
Ligand ID
NDP
InChI
InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
ACFIXJIJDZMPPO-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)C1=CN(C=CC1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)N5C=CCC(=C5)C(=O)N)O)O)O)OP(=O)(O)O)N
Formula
C21 H30 N7 O17 P3
Name
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
ChEMBL
CHEMBL407009
DrugBank
DB02338
ZINC
ZINC000008215411
PDB chain
4tqg Chain A Residue 400 [
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Receptor-Ligand Complex Structure
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PDB
4tqg
Giant Virus Megavirus chilensis Encodes the Biosynthetic Pathway for Uncommon Acetamido Sugars.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
G12 S14 G15 S16 L17 R36 D37 D59 I60 A81 A82 A83 K85 V128 Y140 K144 Y168 G169 V171
Binding residue
(residue number reindexed from 1)
G12 S14 G15 S16 L17 R36 D37 D59 I60 A81 A82 A83 K85 V128 Y140 K144 Y168 G169 V171
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
View graph for
Molecular Function
External links
PDB
RCSB:4tqg
,
PDBe:4tqg
,
PDBj:4tqg
PDBsum
4tqg
PubMed
25035429
UniProt
G5CSR9
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