Structure of PDB 4tlc Chain A Binding Site BS01
Receptor Information
>4tlc Chain A (length=227) Species:
1140
(Synechococcus elongatus PCC 7942 = FACHB-805) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGI
IEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPGF
DLSALIERINYAIQKYRARRVSIDGVTSVFQQYDASSVVRRELFRLVARL
KQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLE
ILKLRGTSHMKGEYPFTITDHGINIFP
Ligand information
Ligand ID
AGS
InChI
InChI=1S/C10H16N5O12P3S/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(25-10)1-24-28(18,19)26-29(20,21)27-30(22,23)31/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H,20,21)(H2,11,12,13)(H2,22,23,31)/t4-,6-,7-,10-/m1/s1
InChIKey
NLTUCYMLOPLUHL-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(OP(=S)(O)O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
Formula
C10 H16 N5 O12 P3 S
Name
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER;
ATP-GAMMA-S;
ADENOSINE 5'-(3-THIOTRIPHOSPHATE);
ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE);
ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE
ChEMBL
CHEMBL131890
DrugBank
DB02930
ZINC
ZINC000008295128
PDB chain
4tlc Chain A Residue 303 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4tlc
Atomic-scale origins of slowness in the cyanobacterial circadian clock
Resolution
2.09 Å
Binding residue
(original residue number in PDB)
S48 G49 G51 K52 T53 L54 S89 F90 I239 T240
Binding residue
(residue number reindexed from 1)
S34 G35 G37 K38 T39 L40 S75 F76 I218 T219
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.11.1
: non-specific serine/threonine protein kinase.
3.6.4.-
Gene Ontology
Molecular Function
GO:0005524
ATP binding
View graph for
Molecular Function
External links
PDB
RCSB:4tlc
,
PDBe:4tlc
,
PDBj:4tlc
PDBsum
4tlc
PubMed
26113637
UniProt
Q79PF4
|KAIC_SYNE7 Circadian clock oscillator protein KaiC (Gene Name=kaiC)
[
Back to BioLiP
]