Structure of PDB 4q7z Chain A Binding Site BS01
Receptor Information
>4q7z Chain A (length=233) Species:
9606
(Homo sapiens) [
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IIGGHEVTPHSRPYMASVRFGGQHHCGGFLLRARWVVSAAHCFSHRDLRT
GLVVLGAHVLSTAEPTQQVFGIDALTTHPDYHPMTHANDICLLRLNGSAV
LGPAVGLLRLPGRRARPPTAGTRCRVAGWGFVSDFEELPPGLMEAKVRVL
DPDVCNSSWKGHLTLTMLCTRSGDSHRRGFCSADSGGPLVCRNRAHGLVS
FSGLWCGDPKTPDVYTQVSAFVAWIWDVVRRSS
Ligand information
Ligand ID
2YT
InChI
InChI=1S/C25H35ClN6O3/c26-16-22(33)20(12-7-13-30-25(28)29)31-24(35)21(15-18-10-5-2-6-11-18)32-23(34)19(27)14-17-8-3-1-4-9-17/h1-6,8-11,19-22,33H,7,12-16,27H2,(H,31,35)(H,32,34)(H4,28,29,30)/t19-,20-,21-,22+/m0/s1
InChIKey
ZKHBINZTIMXMQW-MYGLTJDJSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
c1ccc(cc1)CC(C(=O)NC(Cc2ccccc2)C(=O)NC(CCCNC(=N)N)C(CCl)O)N
OpenEye OEToolkits 1.7.6
[H]/N=C(/N)\NCCC[C@@H]([C@@H](CCl)O)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc2ccccc2)N
CACTVS 3.385
N[CH](Cc1ccccc1)C(=O)N[CH](Cc2ccccc2)C(=O)N[CH](CCCNC(N)=N)[CH](O)CCl
ACDLabs 12.01
ClCC(O)C(NC(=O)C(NC(=O)C(N)Cc1ccccc1)Cc2ccccc2)CCCNC(=[N@H])N
CACTVS 3.385
N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CCCNC(N)=N)[C@H](O)CCl
Formula
C25 H35 Cl N6 O3
Name
L-phenylalanyl-N-[(2S,3S)-6-carbamimidamido-1-chloro-2-hydroxyhexan-3-yl]-L-phenylalaninamide;
PHE-PHE-ARG-chloromethylketone
ChEMBL
DrugBank
ZINC
ZINC000098208360
PDB chain
4q7z Chain A Residue 304 [
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Receptor-Ligand Complex Structure
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PDB
4q7z
Structures of neutrophil serine protease 4 reveal an unusual mechanism of substrate recognition by a trypsin-fold protease.
Resolution
1.4 Å
Binding residue
(original residue number in PDB)
H57 D102 F190 C191 S192 A193 S195 S214 F215 S216 C220
Binding residue
(residue number reindexed from 1)
H41 D89 F180 C181 S182 A183 S185 S200 F201 S202 C206
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H57 D102 S192 A193 D194 S195 G196
Catalytic site (residue number reindexed from 1)
H41 D89 S182 A183 D184 S185 G186
Enzyme Commision number
3.4.21.-
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0008201
heparin binding
GO:0008236
serine-type peptidase activity
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0035578
azurophil granule lumen
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4q7z
,
PDBe:4q7z
,
PDBj:4q7z
PDBsum
4q7z
PubMed
25156428
UniProt
Q6UWY2
|PRS57_HUMAN Serine protease 57 (Gene Name=PRSS57)
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