Structure of PDB 4phg Chain A Binding Site BS01

Receptor Information
>4phg Chain A (length=176) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNILKVIILGDSGVGKTSLMHRYVNDKYSCQYIATIGADFLTKEVTVDGD
KVATMQVWDTAGLERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRD
EFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLF
LTSAKNAINVDTAFEEIARSALQQNQ
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain4phg Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4phg Locking GTPases covalently in their functional states.
Resolution1.9 Å
Binding residue
(original residue number in PDB)
T22 T40
Binding residue
(residue number reindexed from 1)
T17 T35
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:4phg, PDBe:4phg, PDBj:4phg
PDBsum4phg
PubMed26178622
UniProtP32939|YPT7_YEAST Ypt/Rab-type GTPase YPT7 (Gene Name=YPT7)

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