Structure of PDB 4ol9 Chain A Binding Site BS01
Receptor Information
>4ol9 Chain A (length=297) Species:
1773
(Mycobacterium tuberculosis) [
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HMIATGIALVGPGAVGTTVAALLHKAGYSPLLCGHTPRAGIELRRDGADP
IVVPGPVHTSPREVAGPVDVLILAVKATQNDAARPWLTRLCDERTVVAVL
QNGVEQVEQVQPHCPSSAVVPAIVWCSAETQPQGWVRLRGEAALVVPTGP
AAEQFAGLLRGAGATVDCDPDFTTAAWRKLLVNALAGFMVLSGRRSAMFR
RDDVAALSRRYVAECLAVARAEGARLDDDVVDEVVRLVRSAPQDMGTSML
ADRAAHRPLEWDLRNGVIVRKARAHGLATPISDVLVPLLAAASDGPG
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
4ol9 Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
4ol9
Crystal Structure of putative 2-dehydropantoate 2-reductase PanE from Mycobacterium tuberculosis complexed with NADP and oxamate
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
G9 P10 G11 A12 V13 G32 H33 T34 A72 V73 K74 Q77 A80 W84 L98 Q99 N100 V122 C124 A126 R255 E258
Binding residue
(residue number reindexed from 1)
G11 P12 G13 A14 V15 G34 H35 T36 A74 V75 K76 Q79 A82 W86 L100 Q101 N102 V124 C126 A128 R257 E260
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
K177
Catalytic site (residue number reindexed from 1)
K179
Enzyme Commision number
1.1.1.169
: 2-dehydropantoate 2-reductase.
Gene Ontology
Molecular Function
GO:0008677
2-dehydropantoate 2-reductase activity
GO:0016491
oxidoreductase activity
GO:0050661
NADP binding
Biological Process
GO:0015940
pantothenate biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4ol9
,
PDBe:4ol9
,
PDBj:4ol9
PDBsum
4ol9
PubMed
UniProt
P9WIL1
|PANE_MYCTU 2-dehydropantoate 2-reductase (Gene Name=Rv2573)
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