Structure of PDB 4o48 Chain A Binding Site BS01

Receptor Information
>4o48 Chain A (length=298) Species: 10141 (Cavia porcellus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMEPVLVVHGGGASCISCERRQRVRQGVIRAASLGHGVLRAGGSAVDAVE
AAVAALEDDAEFNAGHGSVLTENGDVEMDASIMDGRDLGAGAVSAVRCIA
NPIKLARLVMDKTPHCFLTGQGAAKFAADMGISEIPGEQLVTERNRKRLE
KERQEKTVGAVALDCKGNVAYATSTGGIVNKMTGRVGDSPCIGSGGYADN
SIGAVSTTGHGESILKVNLARLALFHLEQGGKTVDEAADLALGYMKSRLK
GLGGLILVSRTGEWVAKWTSTSMPWAAVKGGKVHAGIDLNDTTVTDLC
Ligand information
Ligand IDASP
InChIInChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)/t2-/m0/s1
InChIKeyCKLJMWTZIZZHCS-REOHCLBHSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(C(=O)O)N)C(=O)O
OpenEye OEToolkits 1.7.0C([C@@H](C(=O)O)N)C(=O)O
CACTVS 3.370N[CH](CC(O)=O)C(O)=O
CACTVS 3.370N[C@@H](CC(O)=O)C(O)=O
ACDLabs 12.01O=C(O)CC(N)C(=O)O
FormulaC4 H7 N O4
NameASPARTIC ACID
ChEMBLCHEMBL274323
DrugBankDB00128
ZINCZINC000000895032
PDB chain4o48 Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4o48 Structural and Kinetic Characterization of Guinea Pig l-Asparaginase Type III.
Resolution2.29 Å
Binding residue
(original residue number in PDB)		T168 I189 R196 D199 T219 G220
Binding residue
(residue number reindexed from 1)		T157 I178 R185 D188 T208 G209
Annotation score5
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 22 07:19:46 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4o48', asym_id = 'A', bs = 'BS01', title = 'Structural and Kinetic Characterization of Guinea Pig l-Asparaginase Type III.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4o48', asym_id='A', bs='BS01', title='Structural and Kinetic Characterization of Guinea Pig l-Asparaginase Type III.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004067,0016787', uniprot = '', pdbid = '4o48', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004067,0016787', uniprot='', pdbid='4o48', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>