Structure of PDB 4n67 Chain A Binding Site BS01
Receptor Information
>4n67 Chain A (length=214) Species:
283165
(Bartonella quintana str. Toulouse) [
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HMEHNYFYKNSATLKNKHGIKNPRKLYERCAHETAREAVNFRLEPPPGKF
DAAYLRTIHWCLFHKTFEWAGVTRDQPFTFEDGSTACMPAMRPKGYKVPF
AVGSQIQRELKKLEQRLTAKNNLQGLSRQEFAANAAEVFTALDHAHPFRK
GNGRTQRMFMEKLGQAAGYKIDFSLITKERMTYASIEAMQHNNPEPMKDL
FEDITHPQKSLLLK
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4n67 Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
4n67
Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
P93 Y96 F139 D143 G151 N152 G153 S185 I186 M189
Binding residue
(residue number reindexed from 1)
P93 Y96 F139 D143 G151 N152 G153 S185 I186 M189
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.7.108
: protein adenylyltransferase.
External links
PDB
RCSB:4n67
,
PDBe:4n67
,
PDBj:4n67
PDBsum
4n67
PubMed
34442725
UniProt
A0A0H3LV04
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