Structure of PDB 4mye Chain A Binding Site BS01

Receptor Information
>4mye Chain A (length=237) Species: 202239 (Cymbosema roseum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTA
HISYNSVAKRLTAVVSYSGSSSTTVSYDVDLTNVLPEWVRVGLSATTGLY
KETNTILSWSFTSKLKTNSIADANALHFSFNQFTQNPKDLILQGDATTDS
DGNLELTKVSSSGSPQGSSVGRALFYAPVHIWESSAVVASFDATFTFLIK
SPDSEPADGITFFIANTDTSIPSGSSGRLLGLFPDAN
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain4mye Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4mye Cymosema roseum seed lectin structure complexed with X-man
Resolution1.65 Å
Binding residue
(original residue number in PDB)		E8 D10 D19 H24
Binding residue
(residue number reindexed from 1)		E8 D10 D19 H24
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4mye, PDBe:4mye, PDBj:4mye
PDBsum4mye
PubMed
UniProtP86184|LECA_CYMRO Mannose-specific lectin alpha chain

[Back to BioLiP]