Structure of PDB 4m6f Chain A Binding Site BS01
Receptor Information
>4m6f Chain A (length=188) Species:
10677
(Muvirus mu) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKR
LQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMG
RFFFHVMGALAEVERELIIERTMAGLAAARNKGRIGGRPPKLTKAEQEQA
GRLLAQGIPRKQVALIYDVALSTLYKKHPAKRAHIEND
Ligand information
>4m6f Chain B (length=17) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aagtttttgataagttt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4m6f
Exploiting large non-isomorphous differences for phase determination of a G-segment invertase-DNA complex.
Resolution
4.99 Å
Binding residue
(original residue number in PDB)
M70 K71 L127 G137 G138 R139 P141 V170 A171 L172 S173 T174 R183 A184 H185 I186 E187 N188 D189
Binding residue
(residue number reindexed from 1)
M69 K70 L126 G136 G137 R138 P140 V169 A170 L171 S172 T173 R182 A183 H184 I185 E186 N187 D188
Enzymatic activity
Enzyme Commision number
3.1.22.-
6.5.1.-
Gene Ontology
Molecular Function
GO:0000150
DNA strand exchange activity
GO:0003677
DNA binding
GO:0016787
hydrolase activity
GO:0016874
ligase activity
Biological Process
GO:0006310
DNA recombination
GO:0015074
DNA integration
GO:0046718
symbiont entry into host cell
GO:0098678
viral tropism switching
Cellular Component
GO:0030430
host cell cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4m6f
,
PDBe:4m6f
,
PDBj:4m6f
PDBsum
4m6f
PubMed
24598738
UniProt
P03015
|GIN_BPMU Serine recombinase gin (Gene Name=gin)
[
Back to BioLiP
]