Structure of PDB 4lej Chain A Binding Site BS01

Receptor Information

>4lej Chain A (length=355) Species: 88728 (Pinus koraiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

NPYVFHSDRFRIRASSEAGEIRALPNFGEVSELLEGISRYRVTCIEMKPN
TVMLPHYIDAKWILYVTGGRGYIAYVQQNELVKRKLEEGDVFGVPSGHTF
YLVNNDDHNSLRIASLLRTESTMRGEYEPFYVAGGRNPETVYSAFSDDVL
EAAFNTDVQKLEHIFGAHRRGVIFYASEQPKPFNLRNQKPDFENDNGRFT
RAGPKDNPFLDSVDVTVGFGVLNPGTMTAPSHNTKATSIAIVMEGEGRIE
MACPHLQDINYERVRARLRTGTVYVVPAGHPITEIASTNGRLEILWFDIN
TSGNEREFLAGKNNVLQTLEKEVRHLSFNIPRGEEIEEVLQAQKDQVILR
GPQRQ

Ligand information

Ligand ID

InChI

InChI=1S/Cu/q+2

InChIKey

JPVYNHNXODAKFH-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Cu+2]
CACTVS 3.341	[Cu++]

Formula

Name

COPPER (II) ION

PDB chain

4lej Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	4lej Crystal Structure of Korean Pine ( Pinus koraiensis ) 7S Seed Storage Protein with Copper Ligands.
Resolution	2.402 Å
Binding residue (original residue number in PDB)	C338 H340 H379
Binding residue (residue number reindexed from 1)	C253 H255 H280
Annotation score	3

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005507	copper ion binding
GO:0045735	nutrient reservoir activity
GO:0046872	metal ion binding

	Biological Process
GO:0010431	seed maturation
GO:0048316	seed development
GO:0070207	protein homotrimerization

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:4lej, PDBe:4lej, PDBj:4lej
PDBsum	4lej
PubMed	24328105
UniProt	V9VGU0\|VCL_PINKO Vicilin Pin k 2.0101

[Back to BioLiP]