Structure of PDB 4kvz Chain A Binding Site BS01
Receptor Information
>4kvz Chain A (length=269) Species:
1390
(Bacillus amyloliquefaciens) [
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EIETIVRESEANRIQAQTWFSHPEKSKVSFRYDERETSSIRSISIETFLS
FYSSKFNREPYSVLDIGCGQGQVIQYLNSRFQKIELTGIDSSAQAISSAK
KLGINASFICSNAENIMQYVSKKQDIIFIHLCFGLFKNPIAIVNTLIHLL
SDQSCIYIVDLDRNSLGEGLNTAQSREEEAYLKDQYRASLTMEEFKQLLH
VVTKEQHGVSFHVGNSFIGGFDETSSQFFSLMRNRNLQDALRTSVGEQLK
QSQMPALLHGWIIKNKRYT
Ligand information
Ligand ID
SAH
InChI
InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKey
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
CACTVS 3.341
N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
Formula
C14 H20 N6 O5 S
Name
S-ADENOSYL-L-HOMOCYSTEINE
ChEMBL
CHEMBL418052
DrugBank
DB01752
ZINC
ZINC000004228232
PDB chain
4kvz Chain A Residue 500 [
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Receptor-Ligand Complex Structure
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PDB
4kvz
Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.
Resolution
1.75 Å
Binding residue
(original residue number in PDB)
Q18 F21 G68 D91 S92 N113 A114 H131 L136 F137
Binding residue
(residue number reindexed from 1)
Q17 F20 G67 D90 S91 N112 A113 H130 L135 F136
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.1.1.-
External links
PDB
RCSB:4kvz
,
PDBe:4kvz
,
PDBj:4kvz
PDBsum
4kvz
PubMed
23878226
UniProt
D3VMM1
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