Structure of PDB 4jz2 Chain A Binding Site BS01
Receptor Information
>4jz2 Chain A (length=202) Species:
272563
(Clostridioides difficile 630) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NNKFKVKPLPYAYDALEPYIDKETMKLHHDKHYQAYVDKLNAALEKYPEL
YNYSLCELLQNLDSLPKDIATTVRNNAGGAYNHKFFFDIMTPEKTIPSES
LKEAIDRDFGSFEKFKQEFQKSALDVFGSGWAWLVATKDGKLSIMTTPNQ
DSPVSKNLTPIIGLDVWEHAYYLKYQNRRNEYIDNWFNVVNWNGALENYK
NL
Ligand information
Ligand ID
CO
InChI
InChI=1S/Co/q+2
InChIKey
XLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Co+2]
CACTVS 3.341
[Co++]
Formula
Co
Name
COBALT (II) ION
ChEMBL
DrugBank
DB14205
ZINC
PDB chain
4jz2 Chain A Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4jz2
Crystal structure of Co ion substituted SOD2 from Clostridium difficile
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
H56 H111 D193 H197
Binding residue
(residue number reindexed from 1)
H28 H83 D165 H169
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.15.1.1
: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784
superoxide dismutase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Biological Process
GO:0006801
superoxide metabolic process
GO:0019430
removal of superoxide radicals
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4jz2
,
PDBe:4jz2
,
PDBj:4jz2
PDBsum
4jz2
PubMed
UniProt
Q186I6
[
Back to BioLiP
]