Structure of PDB 4jqx Chain A Binding Site BS01

Receptor Information
>4jqx Chain A (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAP
WIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYG
CDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAA
RVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
Ligand information
>4jqx Chain B (length=12) Species: 10376 (human gammaherpesvirus 4) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
EECDSELEIKRY
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4jqx HLA Peptide Length Preferences Control CD8+ T Cell Responses.
Resolution1.9 Å
Binding residue
(original residue number in PDB)
Y7 Y9 K45 R62 E63 T73 N77 Y84 I95 R97 Y99 D114 D116 Y123 T143 K146 W147 Y159 L163 S167 R170 Y171
Binding residue
(residue number reindexed from 1)
Y7 Y9 K45 R62 E63 T73 N77 Y84 I95 R97 Y99 D114 D116 Y123 T143 K146 W147 Y159 L163 S167 R170 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:4jqx, PDBe:4jqx, PDBj:4jqx
PDBsum4jqx
PubMed23749632
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

[Back to BioLiP]