Structure of PDB 4jjz Chain A Binding Site BS01

Receptor Information
>4jjz Chain A (length=554) Species: 264732 (Moorella thermoacetica ATCC 39073) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PSDIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDK
PDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREPSLGPS
FGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQG
NVLNIDPRTITWRRVIDLNDRALRNIVIGLGGKANGVPRETGFDISVASE
VMACLCLASDLMDLKERFSRIVVGYTYDGKPVTAGDLEAQGSMALLMKDA
IKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKLADYVVTEAGF
GADLGAEKFYDVKCRYAGFKPDATVIVATVRALKMHGGVPKSDLATENLE
ALREGFANLEKHIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKAGA
EVALSEVWAKGGEGGLELARKVLQTLESRPSNFHVLYNLDLSIKDKIAKI
ATEIYGADGVNYTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLG
RPRNFTITVREVRLSAGAGFIVPITGAIMTMPGLPKRPAACNIDIDADGV
ITGL
Ligand information
Ligand IDADP
InChIInChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyXTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
FormulaC10 H15 N5 O10 P2
NameADENOSINE-5'-DIPHOSPHATE
ChEMBLCHEMBL14830
DrugBankDB16833
ZINCZINC000012360703
PDB chain4jjz Chain A Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4jjz Mechanism of N10-formyltetrahydrofolate synthetase derived from complexes with intermediates and inhibitors.
Resolution2.5 Å
Binding residue
(original residue number in PDB)
A70 E72 G73 K74 T75 T76 G113 N382 F384 P385 W412
Binding residue
(residue number reindexed from 1)
A66 E68 G69 K70 T71 T72 G109 N378 F380 P381 W408
Annotation score5
Enzymatic activity
Catalytic site (original residue number in PDB) K74 T76 R97 K108 A276 F304 F384 W412
Catalytic site (residue number reindexed from 1) K70 T72 R93 K104 A272 F300 F380 W408
Enzyme Commision number 6.3.4.3: formate--tetrahydrofolate ligase.
Gene Ontology
Molecular Function
GO:0004329 formate-tetrahydrofolate ligase activity
GO:0005524 ATP binding
GO:0016874 ligase activity
Biological Process
GO:0006730 one-carbon metabolic process
GO:0035999 tetrahydrofolate interconversion

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4jjz, PDBe:4jjz, PDBj:4jjz
PDBsum4jjz
PubMed22109967
UniProtQ2RM91|FTHS_MOOTA Formate--tetrahydrofolate ligase (Gene Name=fhs)

[Back to BioLiP]