Structure of PDB 4j8f Chain A Binding Site BS01
Receptor Information
>4j8f Chain A (length=551) Species:
9606,10116
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FMAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTER
LIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGD
KPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAY
FNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFD
LGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH
KKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR
ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKL
LQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGLESDLEIDNEGVIEADT
DAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKL
NPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHR
LLGHWEEAARDLALACKLDYDEDASAMLREVQPRAQKIAEHRRKYERKRE
E
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4j8f Chain A Residue 601 [
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Receptor-Ligand Complex Structure
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PDB
4j8f
Structure and function of Hip, an attenuator of the Hsp70 chaperone cycle.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
T14 Y15 G201 G202 E268 K271 R272 S275 G339 S340 R342
Binding residue
(residue number reindexed from 1)
T15 Y16 G202 G203 E269 K272 R273 S276 G340 S341 R343
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
D10 K71 E175 D199
Catalytic site (residue number reindexed from 1)
D11 K72 E176 D200
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0140662
ATP-dependent protein folding chaperone
View graph for
Molecular Function
External links
PDB
RCSB:4j8f
,
PDBe:4j8f
,
PDBj:4j8f
PDBsum
4j8f
PubMed
23812373
UniProt
P0DMV8
|HS71A_HUMAN Heat shock 70 kDa protein 1A (Gene Name=HSPA1A);
P50503
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