Structure of PDB 4j2w Chain A Binding Site BS01
Receptor Information
>4j2w Chain A (length=383) Species:
559292
(Saccharomyces cerevisiae S288C) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MSESVAIIGAGLVGCLAALAFSKEGYNVTLYDFRQDPRLDTTKNKNLKSI
NLAISARGIDALKSIDPDACEHILQDMIPMKGRMIHDLKGRQESQLYGEA
INSINRSVLNNSLLDELEKSTTELKFGHKLVKIEWTDDKQICHFAIGTPH
TEKYDFVIGCDGAYSATRSQMQRKVEMDFSQEYMNLRYIELYIPPTEEFK
PNYGGNFAIAPDHLHIWPRHKFMLIALANSDGSFTSTFFGSKDQISDLIT
SKSRVREFLIENFPDIINIMDLDDAVKRFITYPKESLVCVNCKPYDVPGG
KAILLGDAAHAMVPFYGQGMNCGFEDVRILMALLKKHSGDRSRAFTEYTQ
TRHKDLVSITELAKRNYKEMSHDVTSKRFLLRK
Ligand information
Ligand ID
FAD
InChI
InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1
InChIKey
VWWQXMAJTJZDQX-UYBVJOGSSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P@](O)(=O)O[P@@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)c2cc1C
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO[P@@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)c2cc1C
ACDLabs 10.04
O=C2C3=Nc1cc(c(cc1N(C3=NC(=O)N2)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC6OC(n5cnc4c(ncnc45)N)C(O)C6O)C)C
Formula
C27 H33 N9 O15 P2
Name
FLAVIN-ADENINE DINUCLEOTIDE
ChEMBL
CHEMBL1232653
DrugBank
DB03147
ZINC
ZINC000008215434
PDB chain
4j2w Chain A Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4j2w
Structural basis of kynurenine 3-monooxygenase inhibition.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
I8 G9 G11 V13 D32 F33 S49 L52 A53 R109 L133 D168 G169 Y195 G313 D314 Q325 G326 M327 N328
Binding residue
(residue number reindexed from 1)
I8 G9 G11 V13 D32 F33 S49 L52 A53 R106 L130 D161 G162 Y188 G306 D307 Q318 G319 M320 N321
Annotation score
2
Enzymatic activity
Enzyme Commision number
1.14.13.9
: kynurenine 3-monooxygenase.
Gene Ontology
Molecular Function
GO:0071949
FAD binding
View graph for
Molecular Function
External links
PDB
RCSB:4j2w
,
PDBe:4j2w
,
PDBj:4j2w
PDBsum
4j2w
PubMed
23575632
UniProt
P38169
|KMO_YEAST Kynurenine 3-monooxygenase (Gene Name=BNA4)
[
Back to BioLiP
]