Structure of PDB 4in9 Chain A Binding Site BS01
Receptor Information
>4in9 Chain A (length=162) Species:
28112
(Tannerella forsythia) [
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YVLQGSKWNKTTLKYYIYNLTTTERENAIRSAFALWSDKSTLSFIQVYNP
NQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDE
NWSINGSGIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIKRQLDNDD
CLAVWDLYGYPF
Ligand information
>4in9 Chain B (length=4) Species:
32630
(synthetic construct) [
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SWFP
Receptor-Ligand Complex Structure
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PDB
4in9
Structure of the catalytic domain of the Tannerella forsythia matrix metallopeptidase karilysin in complex with a tetrapeptidic inhibitor.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
L115 A116 V152 H155 E156 H159 H165 P175 Y176 Y177
Binding residue
(residue number reindexed from 1)
L77 A78 V114 H117 E118 H121 H127 P137 Y138 Y139
Enzymatic activity
Catalytic site (original residue number in PDB)
H155 E156 H159 H165
Catalytic site (residue number reindexed from 1)
H117 E118 H121 H127
Enzyme Commision number
3.4.24.-
Gene Ontology
Molecular Function
GO:0004222
metalloendopeptidase activity
GO:0008237
metallopeptidase activity
GO:0008270
zinc ion binding
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0031012
extracellular matrix
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Cellular Component
External links
PDB
RCSB:4in9
,
PDBe:4in9
,
PDBj:4in9
PDBsum
4in9
PubMed
23695557
UniProt
D0EM77
|KLY_TANFA Karilysin (Gene Name=kly)
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