Structure of PDB 4h75 Chain A Binding Site BS01
Receptor Information
>4h75 Chain A (length=199) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PVSQPRRNIVGCRIQHGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDGF
DCVYGLELNKDERVSALEVLPDRVATSRISDAHLADTMIGKAVEHMFETE
DGSKDEWRGMVLARAPVMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMP
DSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLV
Ligand information
>4h75 Chain B (length=8) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ARTKQTAR
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4h75
Distinct mode of methylated lysine-4 of histone H3 recognition by tandem tudor-like domains of Spindlin1.
Resolution
2.098 Å
Binding residue
(original residue number in PDB)
D95 C96 Y98 F141 E142 W151 Y170 D173 Y177 Y179 Q180 D184 D189 H252
Binding residue
(residue number reindexed from 1)
D51 C52 Y54 F97 E98 W107 Y126 D129 Y133 Y135 Q136 D140 D145 H192
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0035064
methylated histone binding
Biological Process
GO:0006325
chromatin organization
GO:0006355
regulation of DNA-templated transcription
GO:0007276
gamete generation
GO:0009303
rRNA transcription
GO:0016055
Wnt signaling pathway
GO:0030177
positive regulation of Wnt signaling pathway
GO:0045893
positive regulation of DNA-templated transcription
GO:0051321
meiotic cell cycle
Cellular Component
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005730
nucleolus
GO:0005819
spindle
GO:0005829
cytosol
GO:0031965
nuclear membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4h75
,
PDBe:4h75
,
PDBj:4h75
PDBsum
4h75
PubMed
23077255
UniProt
Q9Y657
|SPIN1_HUMAN Spindlin-1 (Gene Name=SPIN1)
[
Back to BioLiP
]