Structure of PDB 4gz1 Chain A Binding Site BS01

Receptor Information
>4gz1 Chain A (length=254) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIP
PYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMM
RNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDST
TVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNL
RIPAAYKHRFDRIFFRAEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTL
NVVL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4gz1 Mechanism of repair of 5'-topoisomerase II-DNA adducts by mammalian tyrosyl-DNA phosphodiesterase 2.
Resolution1.5 Å
Binding residue
(original residue number in PDB)		H236 S239 R241 D272 N274 R276 W307 I317 Y321 H359
Binding residue
(residue number reindexed from 1)		H121 S124 R126 D157 N159 R161 W192 I202 Y206 H243
Enzymatic activity
Enzyme Commision number 3.1.4.-
Gene Ontology
Molecular Function
GO:0003824 catalytic activity

View graph for
Molecular Function
External links
PDB RCSB:4gz1, PDBe:4gz1, PDBj:4gz1
PDBsum4gz1
PubMed23104055
UniProtQ9JJX7|TYDP2_MOUSE Tyrosyl-DNA phosphodiesterase 2 (Gene Name=Tdp2)

[Back to BioLiP]