Structure of PDB 4g4z Chain A Binding Site BS01
Receptor Information
>4g4z Chain A (length=120) Species:
470
(Acinetobacter baumannii) [
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MELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGH
TDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADN
KTKEGRAMNRRVFATITGSR
Ligand information
Ligand ID
DAL
InChI
InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)/t2-/m1/s1
InChIKey
QNAYBMKLOCPYGJ-UWTATZPHSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CC(C(=O)O)N
CACTVS 3.341
C[CH](N)C(O)=O
CACTVS 3.341
C[C@@H](N)C(O)=O
ACDLabs 10.04
O=C(O)C(N)C
OpenEye OEToolkits 1.5.0
C[C@H](C(=O)O)N
Formula
C3 H7 N O2
Name
D-ALANINE
ChEMBL
CHEMBL66693
DrugBank
DB01786
ZINC
ZINC000004658556
PDB chain
4g4z Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
4g4z
Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
T236 N237 T270 D271 T273 N279 L282 R286 R329
Binding residue
(residue number reindexed from 1)
T17 N18 T51 D52 T54 N60 L63 R67 R110
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Cellular Component
GO:0016020
membrane
View graph for
Cellular Component
External links
PDB
RCSB:4g4z
,
PDBe:4g4z
,
PDBj:4g4z
PDBsum
4g4z
PubMed
UniProt
Q6RYW5
|OMP38_ACIB2 Outer membrane protein Omp38 (Gene Name=omp38)
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