Structure of PDB 4g10 Chain A Binding Site BS01

Receptor Information

>4g10 Chain A (length=263) Species: 13689 (Sphingomonas paucimobilis)

AEPQELTIYHIPGCPFSERVEIMLELKGLRMKDVEIDISKPRPDWLLAKT
GGTTALPLLDVENGESLKESMVILRYLEQRYPEPAVAHPDPFCHAVEGML
AELAGPFSGAGYRMILNREIGKREEMRAAVDAEFGKVDAFLKRYATGSDF
LFDDRFGWAEVAFTPMFKRLWFLDYYEDYEVPANFDRVLRWRAACTAHPA
AQYRSKEELLKLYYDYTQGGGNGRIPEGRSISSFSPDVDWRTRPMPPRDK
WGHAATDAELGLT

Ligand information

• Ligand ID: GSH
• InChI: InChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1
• InChIKey: RWSXRVCMGQZWBV-WDSKDSINSA-N
• SMILES:
  ACDLabs 12.01: O=C(NCC(=O)O)C(NC(=O)CCC(C(=O)O)N)CS
  OpenEye OEToolkits 1.7.6: C(CC(=O)N[C@@H](CS)C(=O)NCC(=O)O)[C@@H](C(=O)O)N
  CACTVS 3.370: N[CH](CCC(=O)N[CH](CS)C(=O)NCC(O)=O)C(O)=O
  CACTVS 3.370: N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
  OpenEye OEToolkits 1.7.6: C(CC(=O)NC(CS)C(=O)NCC(=O)O)C(C(=O)O)N
• Formula: C10 H17 N3 O6 S
• Name: GLUTATHIONE
• ChEMBL: CHEMBL1543
• DrugBank: DB00143
• ZINC: ZINC000003830891
• PDB chain: 4g10 Chain A Residue 300

Receptor-Ligand Complex Structure

Structure summary

• PDB: 4g10 Sphingobium sp. SYK-6 LigG involved in lignin degradation is structurally and biochemically related to the glutathione transferase omega class.
• Resolution: 1.2 Å
• Binding residue (original residue number in PDB): I12 C15 F17 R43 T55 A56 L57 E70 S71
• Binding residue (residue number reindexed from 1): I11 C14 F16 R42 T54 A55 L56 E69 S70
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0016740 transferase activity

Cellular Component

• GO:0005737 cytoplasm

External links

• PDB: RCSB:4g10, PDBe:4g10, PDBj:4g10
• PDBsum: 4g10
• PubMed: 23058289
• UniProt: Q9WXJ9