Structure of PDB 4flg Chain A Binding Site BS01

Receptor Information
>4flg Chain A (length=99) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMVGGI
GGFIKVRQYDQIIIEIAGHKAIGTVLVGPTPVNIIGRNLLTQIGATLNF
Ligand information
>4flg Chain C (length=4) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DQII
Receptor-Ligand Complex Structure
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PDB4flg Capturing the Reaction Pathway in Near-Atomic-Resolution Crystal Structures of HIV-1 Protease.
Resolution1.31 Å
Binding residue
(original residue number in PDB)		D25 G27 A28 D29 D30 V47 G48 G49
Binding residue
(residue number reindexed from 1)		D25 G27 A28 D29 D30 V47 G48 G49
Enzymatic activity
Catalytic site (original residue number in PDB) D25 T26 G27
Catalytic site (residue number reindexed from 1) D25 T26 G27
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.13.2: exoribonuclease H.
3.1.26.13: retroviral ribonuclease H.
3.4.23.16: HIV-1 retropepsin.
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:4flg, PDBe:4flg, PDBj:4flg
PDBsum4flg
PubMed22963370
UniProtP03367|POL_HV1BR Gag-Pol polyprotein (Gene Name=gag-pol)

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