Structure of PDB 4fb3 Chain A Binding Site BS01
Receptor Information
>4fb3 Chain A (length=115) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SDFPSSLTGYLSHAIYSNKTFPAFLVYSTKEKCKQLYDTIGKFRPEFKCL
VHYEEGGMLFFLTMTKHRVSAVKNYCSKLCSVSFLMCKAVTKPMECYQVV
TAAPFQLITENKPGL
Ligand information
>4fb3 Chain C (length=26) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cggaggccaggggcccccggcctctg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4fb3
Polyomavirus large T antigen binds symmetrical repeats at the viral origin in an asymmetrical manner.
Resolution
3.79 Å
Binding residue
(original residue number in PDB)
N307 T309 K355 H356 R357 A360
Binding residue
(residue number reindexed from 1)
N18 T20 K66 H67 R68 A71
Binding affinity
PDBbind-CN
: Kd=38nM
Enzymatic activity
Enzyme Commision number
3.6.4.-
Gene Ontology
Molecular Function
GO:0003688
DNA replication origin binding
Biological Process
GO:0006260
DNA replication
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4fb3
,
PDBe:4fb3
,
PDBj:4fb3
PDBsum
4fb3
PubMed
24109229
UniProt
P0DOJ4
|LT_POVBG Large T antigen
[
Back to BioLiP
]