Structure of PDB 4f6p Chain A Binding Site BS01
Receptor Information
>4f6p Chain A (length=261) Species:
559292
(Saccharomyces cerevisiae S288C) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
YVNASNMYGPPQNMSLPPPQTQTIQGTDQPYQYSQCTGRRKALIIGINYI
GSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANM
IRAMQWLVKDAQPNDSLFLHYSGHGGQTDDVIYPVDFETQGPIIDDEMHD
IMVKPLQQGVRLTALFDSAHSGTVLDLPYTYSTKGIIKEPNIFSAADVVM
LSGSKNTGAMSHAFIKVMTLQPQQSYLSLLQNMRKELAGKYSQKPQLSSS
HPIDVNLQFIM
Ligand information
Ligand ID
DFH
InChI
InChI=1S/C14H14O/c1-14(15,12-8-4-2-5-9-12)13-10-6-3-7-11-13/h2-11,15H,1H3
InChIKey
GIMDPFBLSKQRNP-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
OC(c1ccccc1)(c2ccccc2)C
OpenEye OEToolkits 1.7.6
CC(c1ccccc1)(c2ccccc2)O
CACTVS 3.370
CC(O)(c1ccccc1)c2ccccc2
Formula
C14 H14 O
Name
1,1-diphenylethanol
ChEMBL
DrugBank
ZINC
ZINC000001090568
PDB chain
4f6p Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4f6p
Crystal structure of the metacaspase Yca1
Resolution
1.619 Å
Binding residue
(original residue number in PDB)
D182 Q184 N185 L187 V190
Binding residue
(residue number reindexed from 1)
D86 Q88 N89 L91 V94
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.4.22.-
Gene Ontology
Molecular Function
GO:0004197
cysteine-type endopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4f6p
,
PDBe:4f6p
,
PDBj:4f6p
PDBsum
4f6p
PubMed
UniProt
Q08601
|MCA1_YEAST Metacaspase-1 (Gene Name=MCA1)
[
Back to BioLiP
]