Structure of PDB 4ex6 Chain A Binding Site BS01

Receptor Information
>4ex6 Chain A (length=219) Species: 569580 (Streptomyces sp. CM020) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLP
ASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRL
SAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMA
LHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRA
GADTVVDSFPAAVTAVLDG
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain4ex6 Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4ex6 Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway.
Resolution1.25 Å
Binding residue
(original residue number in PDB)		D15 D17 D175
Binding residue
(residue number reindexed from 1)		D9 D11 D169
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0008967 phosphoglycolate phosphatase activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0016311 dephosphorylation
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4ex6, PDBe:4ex6, PDBj:4ex6
PDBsum4ex6
PubMed23297194
UniProtB6SEG4

[Back to BioLiP]