Structure of PDB 4esg Chain A Binding Site BS01
Receptor Information
>4esg Chain A (length=304) Species:
9606
(Homo sapiens) [
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VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE
KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN
YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN
RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL
AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED
NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW
KSDC
Ligand information
>4esg Chain D (length=16) Species:
9606
(Homo sapiens) [
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EPPLNPHGSARAEVHL
Receptor-Ligand Complex Structure
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PDB
4esg
Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
K46 A65 G89 I90 S91 D107 Y131 F133 F149 Y191 Y260 C261 F263 I305
Binding residue
(residue number reindexed from 1)
K16 A35 G59 I60 S61 D77 Y101 F103 F119 Y161 Y230 C231 F233 I275
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0035064
methylated histone binding
GO:0042393
histone binding
GO:0042800
histone H3K4 methyltransferase activity
Biological Process
GO:0000122
negative regulation of transcription by RNA polymerase II
GO:0001501
skeletal system development
GO:0006094
gluconeogenesis
GO:0006325
chromatin organization
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
GO:0045722
positive regulation of gluconeogenesis
GO:0045815
transcription initiation-coupled chromatin remodeling
GO:0045893
positive regulation of DNA-templated transcription
GO:0045995
regulation of embryonic development
GO:0051302
regulation of cell division
GO:0051726
regulation of cell cycle
GO:0090043
regulation of tubulin deacetylation
Cellular Component
GO:0000123
histone acetyltransferase complex
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0035097
histone methyltransferase complex
GO:0044545
NSL complex
GO:0044665
MLL1/2 complex
GO:0044666
MLL3/4 complex
GO:0048188
Set1C/COMPASS complex
GO:0071339
MLL1 complex
GO:0072686
mitotic spindle
GO:0140672
ATAC complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4esg
,
PDBe:4esg
,
PDBj:4esg
PDBsum
4esg
PubMed
22665483
UniProt
P61964
|WDR5_HUMAN WD repeat-containing protein 5 (Gene Name=WDR5)
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