Structure of PDB 4enm Chain A Binding Site BS01
Receptor Information
>4enm Chain A (length=108) Species:
284812
(Schizosaccharomyces pombe 972h-) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MRMDEFYTKVYDAVCEIPYGKVSTYGEIARYVGMPSYARQVGQAMKHLHP
ETHVPWHRVINSRGTISKRDISAGEQRQKDRLEEEGVEIYQTSLGEYKLN
LPEYMWKP
Ligand information
>4enm Chain B (length=13) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gccatgcctagta
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4enm
Atl1 Regulates Choice between Global Genome and Transcription-Coupled Repair of O(6)-Alkylguanines.
Resolution
2.8402 Å
Binding residue
(original residue number in PDB)
Y25 G26 R39 M45 K46 P50 W56 V59 N61 S62 R69 D70 I71 R77
Binding residue
(residue number reindexed from 1)
Y25 G26 R39 M45 K46 P50 W56 V59 N61 S62 R69 D70 I71 R77
Binding affinity
PDBbind-CN
: Kd=0.08nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003684
damaged DNA binding
GO:0003824
catalytic activity
GO:0003908
methylated-DNA-[protein]-cysteine S-methyltransferase activity
GO:0032132
O6-alkylguanine-DNA binding
Biological Process
GO:0006281
DNA repair
GO:0006283
transcription-coupled nucleotide-excision repair
GO:0070911
global genome nucleotide-excision repair
Cellular Component
GO:0005634
nucleus
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4enm
,
PDBe:4enm
,
PDBj:4enm
PDBsum
4enm
PubMed
22658721
UniProt
Q9UTN9
|ATL1_SCHPO Alkyltransferase-like protein 1 (Gene Name=atl1)
[
Back to BioLiP
]