Structure of PDB 4e9g Chain A Binding Site BS01

Receptor Information
>4e9g Chain A (length=138) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPS
AEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGI
GKYGNDSYRIFCVNEWKQVHPEAHKLNKYHDWLWENHE
Ligand information
Receptor-Ligand Complex Structure
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PDB4e9g Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Resolution2.35 Å
Binding residue
(original residue number in PDB)
Q449 L466 N467 R468 G536 I537 G538 Y540 K562
Binding residue
(residue number reindexed from 1)
Q12 L29 N30 R31 G99 I100 G101 Y103 K125
Enzymatic activity
Enzyme Commision number 3.2.2.-
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003824 catalytic activity
Biological Process
GO:0006281 DNA repair
GO:0006284 base-excision repair

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Molecular Function

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Biological Process
External links
PDB RCSB:4e9g, PDBe:4e9g, PDBj:4e9g
PDBsum4e9g
PubMed22848106
UniProtO95243|MBD4_HUMAN Methyl-CpG-binding domain protein 4 (Gene Name=MBD4)

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