Structure of PDB 4e9g Chain A Binding Site BS01
Receptor Information
>4e9g Chain A (length=138) Species:
9606
(Homo sapiens) [
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WTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPS
AEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGI
GKYGNDSYRIFCVNEWKQVHPEAHKLNKYHDWLWENHE
Ligand information
>4e9g Chain C (length=12) [
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ccagcgtgcagc
Receptor-Ligand Complex Structure
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PDB
4e9g
Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Resolution
2.35 Å
Binding residue
(original residue number in PDB)
Q449 L466 N467 R468 G536 I537 G538 Y540 K562
Binding residue
(residue number reindexed from 1)
Q12 L29 N30 R31 G99 I100 G101 Y103 K125
Enzymatic activity
Enzyme Commision number
3.2.2.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003824
catalytic activity
Biological Process
GO:0006281
DNA repair
GO:0006284
base-excision repair
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Molecular Function
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Biological Process
External links
PDB
RCSB:4e9g
,
PDBe:4e9g
,
PDBj:4e9g
PDBsum
4e9g
PubMed
22848106
UniProt
O95243
|MBD4_HUMAN Methyl-CpG-binding domain protein 4 (Gene Name=MBD4)
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