Structure of PDB 4e0f Chain A Binding Site BS01
Receptor Information
>4e0f Chain A (length=200) Species:
235
(Brucella abortus) [
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MFTGIITDIGKVDRVKPLNEGVLLRIETAYDPETIELGASIACSGVCLTV
VALPEKGSNARWFEVEAWEEALRLTTISSWQSGRKINLERSLKLGDEMGG
HLVFGHVDGQAEIVERKDEGDAVRFTLRAPEELAPFIAQKGSVALDGTSL
TVNGVNANEFDVLLIRHSLEVTTWGERKAGDKVNIEIDQLARYAARLAQY
Ligand information
Ligand ID
RBF
InChI
InChI=1S/C17H20N4O6/c1-7-3-9-10(4-8(7)2)21(5-11(23)14(25)12(24)6-22)15-13(18-9)16(26)20-17(27)19-15/h3-4,11-12,14,22-25H,5-6H2,1-2H3,(H,20,26,27)/t11-,12+,14-/m0/s1
InChIKey
AUNGANRZJHBGPY-SCRDCRAPSA-N
SMILES
Software
SMILES
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO)c2cc1C
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(CO)O)O)O
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO)O)O)O
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO)c2cc1C
ACDLabs 12.01
N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)CO
Formula
C17 H20 N4 O6
Name
RIBOFLAVIN;
RIBOFLAVINE;
VITAMIN B2
ChEMBL
CHEMBL1534
DrugBank
DB00140
ZINC
ZINC000002036848
PDB chain
4e0f Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
4e0f
Crystallographic and kinetic study of riboflavin synthase from Brucella abortus, a chemotherapeutic target with an enhanced intrinsic flexibility.
Resolution
2.85 Å
Binding residue
(original residue number in PDB)
V46 C47 L48 T49 E66 A67 G105 H106 V107
Binding residue
(residue number reindexed from 1)
V46 C47 L48 T49 E66 A67 G105 H106 V107
Annotation score
4
External links
PDB
RCSB:4e0f
,
PDBe:4e0f
,
PDBj:4e0f
PDBsum
4e0f
PubMed
24816110
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