Structure of PDB 4dqd Chain A Binding Site BS01
Receptor Information
>4dqd Chain A (length=361) Species:
316058
(Rhodopseudomonas palustris HaA2) [
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AEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDESDPT
KAAQNARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAIL
VAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVGYIGFSDAYGEGY
YKVLAAAAPKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGT
PAVLPQKALRERGFKGAIYQTHGVATEEFIKLGGKDVEGAIFAGEAFSGA
EDMPADSPFRKVKARFVDAYKAANGGAAPTIFGVHLWDSMTLVENAIPAA
LKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDNHNGYDERSAFLI
EIRDGAFRLKQ
Ligand information
Ligand ID
PPY
InChI
InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,11,12)
InChIKey
BTNMPGBKDVTSJY-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1ccc(cc1)CC(=O)C(=O)O
CACTVS 3.341
OC(=O)C(=O)Cc1ccccc1
ACDLabs 10.04
O=C(C(=O)O)Cc1ccccc1
Formula
C9 H8 O3
Name
3-PHENYLPYRUVIC ACID
ChEMBL
CHEMBL1162488
DrugBank
DB03884
ZINC
ZINC000000901485
PDB chain
4dqd Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
4dqd
Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Resolution
1.601 Å
Binding residue
(original residue number in PDB)
L40 L95 T96 A117 A118 V137 Y168 R195 A220 H244
Binding residue
(residue number reindexed from 1)
L18 L73 T74 A95 A96 V115 Y146 R173 A198 H222
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4dqd
,
PDBe:4dqd
,
PDBj:4dqd
PDBsum
4dqd
PubMed
23606130
UniProt
Q2IR47
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