Structure of PDB 4d26 Chain A Binding Site BS01

Receptor Information
>4d26 Chain A (length=430) Species: 7091 (Bombyx mori) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFE
TANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAA
FLVPIINMLLQDPKDLISENGCAQPQVIIVSPTRELTLQIFNEARKFSYG
SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR
FVVLDQADCMLDMGFMPSIEKMMLHPTMVETTKRQTLMFSATFPEDIQHL
AGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIEENDGKR
ILVFVETKRNADFIAAMLSEQQLLTSSIHGDRMQREREEALQNFKSGKHC
ILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS
FYDSDQDLALVADLSKILRQADQSVPDFLK
Ligand information
Receptor-Ligand Complex Structure
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PDB4d26 RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		P265 T266 R267 G293 G294 T314 G316 R317 D320 F348 E439 T440 K441 H462 G463 R470 T488 V490
Binding residue
(residue number reindexed from 1)		P132 T133 R134 G160 G161 T181 G183 R184 D187 F215 E306 T307 K308 H329 G330 R337 T355 V357
Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003724 RNA helicase activity
GO:0005524 ATP binding

View graph for
Molecular Function
External links
PDB RCSB:4d26, PDBe:4d26, PDBj:4d26
PDBsum4d26
PubMed24910301
UniProtO01378

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